Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CXCL3P19876 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCL3P19876 AL031985.4-201ENST00000642138 673 ntBASIC14.28□□□□□ -0.12
CXCL3P19876 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CXCL3P19876 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CXCL3P19876 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.28□□□□□ -0.12
CXCL3P19876 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.27□□□□□ -0.12
CXCL3P19876 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CXCL3P19876 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CXCL3P19876 FRMD8P1-201ENST00000440433 1524 ntBASIC14.27□□□□□ -0.12
CXCL3P19876 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.27□□□□□ -0.12
CXCL3P19876 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 KRT16P1-201ENST00000399124 1418 ntBASIC14.27□□□□□ -0.12
CXCL3P19876 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.27□□□□□ -0.12
CXCL3P19876 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CXCL3P19876 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CXCL3P19876 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL3P19876 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CXCL3P19876 B3GAT3P1-201ENST00000471720 806 ntBASIC14.27□□□□□ -0.13
CXCL3P19876 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CXCL3P19876 AP002982.1-201ENST00000492365 877 ntBASIC14.27□□□□□ -0.13
CXCL3P19876 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL3P19876 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL3P19876 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CXCL3P19876 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 AC010240.3-201ENST00000607688 395 ntBASIC14.27□□□□□ -0.13
CXCL3P19876 AP000692.2-201ENST00000608391 879 ntBASIC14.27□□□□□ -0.13
CXCL3P19876 AL353708.3-201ENST00000610272 989 ntBASIC14.27□□□□□ -0.13
CXCL3P19876 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCL3P19876 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CXCL3P19876 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CXCL3P19876 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL3P19876 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CXCL3P19876 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCL3P19876 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL3P19876 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL3P19876 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL3P19876 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CXCL3P19876 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL3P19876 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 ESRRAP1-201ENST00000400596 1257 ntBASIC14.26□□□□□ -0.13
CXCL3P19876 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL3P19876 KRT18P65-201ENST00000439811 1286 ntBASIC14.26□□□□□ -0.13
CXCL3P19876 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL3P19876 AP002490.2-201ENST00000524791 560 ntBASIC14.26□□□□□ -0.13
CXCL3P19876 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.26□□□□□ -0.13
CXCL3P19876 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL3P19876 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL3P19876 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CXCL3P19876 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CXCL3P19876 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.26□□□□□ -0.13
CXCL3P19876 AC112497.1-201ENST00000624824 639 ntBASIC14.26□□□□□ -0.13
CXCL3P19876 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CXCL3P19876 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CXCL3P19876 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL3P19876 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL3P19876 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL3P19876 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL3P19876 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms