Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC104109.2-201ENST00000602919 1418 ntBASIC14.01□□□□□ -0.17
CCL3L1P16619 AC002310.6-201ENST00000624451 1377 ntBASIC14.01□□□□□ -0.17
CCL3L1P16619 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 MRPL20P1-201ENST00000400819 433 ntBASIC14.01□□□□□ -0.17
CCL3L1P16619 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.01□□□□□ -0.17
CCL3L1P16619 AC009947.1-201ENST00000444350 727 ntBASIC14.01□□□□□ -0.17
CCL3L1P16619 SLC25A1P1-201ENST00000528351 927 ntBASIC14.01□□□□□ -0.17
CCL3L1P16619 DUX4L17-201ENST00000557360 1267 ntBASIC14.01□□□□□ -0.17
CCL3L1P16619 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL3L1P16619 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCL3L1P16619 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL3L1P16619 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL3L1P16619 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CCL3L1P16619 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
CCL3L1P16619 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL3L1P16619 AC105020.1-201ENST00000435356 2205 ntBASIC14□□□□□ -0.17
CCL3L1P16619 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCL3L1P16619 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 RPL13AP23-201ENST00000480739 586 ntBASIC14□□□□□ -0.17
CCL3L1P16619 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 CD63-204ENST00000546939 779 ntTSL 3 BASIC14□□□□□ -0.17
CCL3L1P16619 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14□□□□□ -0.17
CCL3L1P16619 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CCL3L1P16619 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
CCL3L1P16619 Z83851.2-201ENST00000609564 659 ntBASIC14□□□□□ -0.17
CCL3L1P16619 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14□□□□□ -0.17
CCL3L1P16619 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14□□□□□ -0.17
CCL3L1P16619 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14□□□□□ -0.17
CCL3L1P16619 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14□□□□□ -0.17
CCL3L1P16619 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14□□□□□ -0.17
CCL3L1P16619 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 PCDHB17P-201ENST00000539533 2393 ntBASIC14□□□□□ -0.17
CCL3L1P16619 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CCL3L1P16619 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL3L1P16619 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL3L1P16619 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.99□□□□□ -0.17
CCL3L1P16619 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL3L1P16619 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.99□□□□□ -0.17
CCL3L1P16619 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.99□□□□□ -0.17
CCL3L1P16619 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms