Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.09■□□□□ 0.33
THRAP10827 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
THRAP10827 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
THRAP10827 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.08■□□□□ 0.33
THRAP10827 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.08■□□□□ 0.33
THRAP10827 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.08■□□□□ 0.33
THRAP10827 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
THRAP10827 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.08■□□□□ 0.33
THRAP10827 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
THRAP10827 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
THRAP10827 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
THRAP10827 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.08■□□□□ 0.32
THRAP10827 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.08■□□□□ 0.32
THRAP10827 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 RPL13AP23-201ENST00000480739 586 ntBASIC17.08■□□□□ 0.32
THRAP10827 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.08■□□□□ 0.32
THRAP10827 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.08■□□□□ 0.32
THRAP10827 AC025062.2-201ENST00000605477 670 ntBASIC17.08■□□□□ 0.32
THRAP10827 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
THRAP10827 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
THRAP10827 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.08■□□□□ 0.32
THRAP10827 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
THRAP10827 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
THRAP10827 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.07■□□□□ 0.32
THRAP10827 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.07■□□□□ 0.32
THRAP10827 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
THRAP10827 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
THRAP10827 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
THRAP10827 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
THRAP10827 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
THRAP10827 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.07■□□□□ 0.32
THRAP10827 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.07■□□□□ 0.32
THRAP10827 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.07■□□□□ 0.32
THRAP10827 OR7E14P-202ENST00000530490 1290 ntBASIC17.07■□□□□ 0.32
THRAP10827 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
THRAP10827 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
THRAP10827 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
THRAP10827 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
THRAP10827 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THRAP10827 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
THRAP10827 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 AL603756.1-201ENST00000606511 2163 ntBASIC17.06■□□□□ 0.32
THRAP10827 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.06■□□□□ 0.32
THRAP10827 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
THRAP10827 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms