Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 MRPL20P1-201ENST00000400819 433 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 MCCD1P2-201ENST00000423228 335 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 KRT18P2-201ENST00000447938 1258 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AC005829.1-201ENST00000570002 483 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AP001160.2-201ENST00000596071 487 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AC004790.2-201ENST00000623588 572 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AC134684.3-201ENST00000641758 218 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AC046158.3-201ENST00000624947 2558 ntBASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.44■□□□□ 0.22
CCNYL3P0C7X3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 AL138688.1-201ENST00000624851 1594 ntBASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 GPR89P-201ENST00000407924 1495 ntBASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 AL805961.1-202ENST00000641562 540 ntBASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 AC080080.1-201ENST00000625121 2420 ntBASIC16.43■□□□□ 0.22
CCNYL3P0C7X3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCNYL3P0C7X3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms