Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.77■□□□□ 0.27
CAPN1P07384 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CAPN1P07384 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.77■□□□□ 0.27
CAPN1P07384 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CAPN1P07384 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CAPN1P07384 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 AC009336.1-201ENST00000608941 1553 ntBASIC16.77■□□□□ 0.27
CAPN1P07384 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN1P07384 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN1P07384 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN1P07384 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 FLJ38576-201ENST00000623820 2459 ntBASIC16.76■□□□□ 0.27
CAPN1P07384 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 AL135999.2-201ENST00000622438 1686 ntBASIC16.76■□□□□ 0.27
CAPN1P07384 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 AC092068.3-201ENST00000587894 2016 ntBASIC16.76■□□□□ 0.27
CAPN1P07384 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN1P07384 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN1P07384 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 MIR574-201ENST00000385209 96 ntBASIC16.76■□□□□ 0.27
CAPN1P07384 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.76■□□□□ 0.27
CAPN1P07384 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.76■□□□□ 0.27
CAPN1P07384 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 AL118508.1-201ENST00000613502 2345 ntBASIC16.76■□□□□ 0.27
CAPN1P07384 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CAPN1P07384 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CAPN1P07384 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN1P07384 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN1P07384 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CAPN1P07384 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 AC132938.5-201ENST00000624980 1813 ntBASIC16.75■□□□□ 0.27
CAPN1P07384 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CAPN1P07384 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPN1P07384 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CAPN1P07384 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CAPN1P07384 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CAPN1P07384 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CAPN1P07384 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPN1P07384 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPN1P07384 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPN1P07384 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPN1P07384 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPN1P07384 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPN1P07384 AC139887.3-201ENST00000568585 713 ntBASIC16.75■□□□□ 0.27
CAPN1P07384 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.75■□□□□ 0.27
CAPN1P07384 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CAPN1P07384 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
CAPN1P07384 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPN1P07384 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPN1P07384 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CAPN1P07384 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 EGFEM1P-202ENST00000431685 1563 ntBASIC16.75■□□□□ 0.27
CAPN1P07384 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
CAPN1P07384 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CAPN1P07384 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CAPN1P07384 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN1P07384 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms