Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
CSF1RP07333 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
CSF1RP07333 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.7■□□□□ 0.9
CSF1RP07333 FOXO1B-201ENST00000504678 1527 ntBASIC20.7■□□□□ 0.9
CSF1RP07333 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSF1RP07333 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CSF1RP07333 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSF1RP07333 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSF1RP07333 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CSF1RP07333 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.7■□□□□ 0.9
CSF1RP07333 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.7■□□□□ 0.9
CSF1RP07333 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.7■□□□□ 0.9
CSF1RP07333 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSF1RP07333 FAM86GP-201ENST00000448322 971 ntBASIC20.7■□□□□ 0.9
CSF1RP07333 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSF1RP07333 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.7■□□□□ 0.9
CSF1RP07333 SPCS2P1-201ENST00000561636 679 ntBASIC20.7■□□□□ 0.9
CSF1RP07333 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.7■□□□□ 0.9
CSF1RP07333 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.7■□□□□ 0.9
CSF1RP07333 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSF1RP07333 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CSF1RP07333 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSF1RP07333 AL645728.1-201ENST00000366221 2101 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CSF1RP07333 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 AC020763.4-201ENST00000623414 4170 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.69■□□□□ 0.9
CSF1RP07333 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 CNN2P2-201ENST00000443536 909 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 CNN2P3-201ENST00000450201 906 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.69■□□□□ 0.9
CSF1RP07333 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 KRT18P34-201ENST00000488218 1270 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.69■□□□□ 0.9
CSF1RP07333 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.69■□□□□ 0.9
CSF1RP07333 LINC02084-201ENST00000606069 1096 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 AL136317.3-201ENST00000618497 906 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 AL139011.1-202ENST00000642063 584 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.69■□□□□ 0.9
CSF1RP07333 TUBB3P1-201ENST00000405796 1332 ntBASIC20.69■□□□□ 0.9
CSF1RP07333 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.69■□□□□ 0.9
CSF1RP07333 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSF1RP07333 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CSF1RP07333 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CSF1RP07333 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.68■□□□□ 0.9
CSF1RP07333 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.68■□□□□ 0.9
CSF1RP07333 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.68■□□□□ 0.9
CSF1RP07333 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.68■□□□□ 0.9
CSF1RP07333 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.68■□□□□ 0.9
CSF1RP07333 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.68■□□□□ 0.9
CSF1RP07333 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.68■□□□□ 0.9
CSF1RP07333 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.68■□□□□ 0.9
CSF1RP07333 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CSF1RP07333 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 AC060834.1-201ENST00000443027 2032 ntBASIC20.68■□□□□ 0.9
CSF1RP07333 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CSF1RP07333 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSF1RP07333 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CSF1RP07333 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.67■□□□□ 0.9
CSF1RP07333 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.67■□□□□ 0.9
CSF1RP07333 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSF1RP07333 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CSF1RP07333 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSF1RP07333 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSF1RP07333 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CSF1RP07333 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSF1RP07333 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSF1RP07333 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.67■□□□□ 0.9
CSF1RP07333 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.67■□□□□ 0.9
CSF1RP07333 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms