Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.99■■□□□ 1.11
COL5A2P05997 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 AL354751.1-201ENST00000412768 1863 ntBASIC21.99■■□□□ 1.11
COL5A2P05997 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.99■■□□□ 1.11
COL5A2P05997 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
COL5A2P05997 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.99■■□□□ 1.11
COL5A2P05997 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL5A2P05997 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.98■■□□□ 1.11
COL5A2P05997 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
COL5A2P05997 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.98■■□□□ 1.11
COL5A2P05997 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL5A2P05997 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.98■■□□□ 1.11
COL5A2P05997 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.98■■□□□ 1.11
COL5A2P05997 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.98■■□□□ 1.11
COL5A2P05997 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL5A2P05997 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.98■■□□□ 1.11
COL5A2P05997 AC099568.2-201ENST00000609194 695 ntBASIC21.98■■□□□ 1.11
COL5A2P05997 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.98■■□□□ 1.11
COL5A2P05997 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.98■■□□□ 1.11
COL5A2P05997 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL5A2P05997 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL5A2P05997 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
COL5A2P05997 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.97■■□□□ 1.11
COL5A2P05997 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL5A2P05997 SNX29P1-201ENST00000548357 1007 ntBASIC21.97■■□□□ 1.11
COL5A2P05997 MIR4259-201ENST00000584466 101 ntBASIC21.97■■□□□ 1.11
COL5A2P05997 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL5A2P05997 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.97■■□□□ 1.11
COL5A2P05997 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL5A2P05997 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL5A2P05997 AL671710.1-201ENST00000610245 2349 ntBASIC21.97■■□□□ 1.11
COL5A2P05997 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
COL5A2P05997 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL5A2P05997 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.96■■□□□ 1.11
COL5A2P05997 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 ELK1P1-201ENST00000485699 580 ntBASIC21.96■■□□□ 1.11
COL5A2P05997 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.96■■□□□ 1.11
COL5A2P05997 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.96■■□□□ 1.11
COL5A2P05997 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL5A2P05997 SRD5A3P1-201ENST00000603021 949 ntBASIC21.96■■□□□ 1.11
COL5A2P05997 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.96■■□□□ 1.11
COL5A2P05997 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.96■■□□□ 1.11
COL5A2P05997 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.96■■□□□ 1.11
COL5A2P05997 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
COL5A2P05997 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL5A2P05997 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.96■■□□□ 1.11
COL5A2P05997 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL5A2P05997 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL5A2P05997 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL5A2P05997 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.96■■□□□ 1.11
COL5A2P05997 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.96■■□□□ 1.11
COL5A2P05997 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL5A2P05997 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.96■■□□□ 1.11
COL5A2P05997 AC092658.1-201ENST00000505836 891 ntBASIC21.96■■□□□ 1.11
COL5A2P05997 AC023310.3-201ENST00000557027 670 ntBASIC21.96■■□□□ 1.11
COL5A2P05997 AC100756.1-201ENST00000562736 682 ntBASIC21.96■■□□□ 1.11
COL5A2P05997 AC138749.3-201ENST00000567691 622 ntBASIC21.96■■□□□ 1.11
COL5A2P05997 AC116165.1-201ENST00000611806 668 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms