Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 AL022342.1-201ENST00000400363 863 ntBASIC13.12□□□□□ -0.31
TRBV12-3P01733 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 AC145285.3-201ENST00000564603 959 ntBASIC13.12□□□□□ -0.31
TRBV12-3P01733 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 AC106886.4-201ENST00000623557 2502 ntBASIC13.12□□□□□ -0.31
TRBV12-3P01733 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV12-3P01733 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV12-3P01733 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 RNF216P1-203ENST00000404404 2427 ntBASIC13.11□□□□□ -0.31
TRBV12-3P01733 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 AC007967.2-201ENST00000432613 625 ntBASIC13.11□□□□□ -0.31
TRBV12-3P01733 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRBV12-3P01733 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV12-3P01733 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms