Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TOP3BO95985 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP3BO95985 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TOP3BO95985 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.43■□□□□ 0.38
TOP3BO95985 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.43■□□□□ 0.38
TOP3BO95985 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TOP3BO95985 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TOP3BO95985 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TOP3BO95985 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TOP3BO95985 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TOP3BO95985 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.42■□□□□ 0.38
TOP3BO95985 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP3BO95985 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 KRT18P2-201ENST00000447938 1258 ntBASIC17.42■□□□□ 0.38
TOP3BO95985 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TOP3BO95985 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP3BO95985 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP3BO95985 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP3BO95985 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.42■□□□□ 0.38
TOP3BO95985 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.42■□□□□ 0.38
TOP3BO95985 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TOP3BO95985 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.42■□□□□ 0.38
TOP3BO95985 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
TOP3BO95985 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 AC010460.3-201ENST00000511359 1579 ntBASIC17.41■□□□□ 0.38
TOP3BO95985 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TOP3BO95985 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.41■□□□□ 0.38
TOP3BO95985 ABCD1P5-201ENST00000445663 754 ntBASIC17.41■□□□□ 0.38
TOP3BO95985 MTCL1P1-201ENST00000446207 792 ntBASIC17.41■□□□□ 0.38
TOP3BO95985 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.41■□□□□ 0.38
TOP3BO95985 AC068472.1-201ENST00000474589 881 ntBASIC17.41■□□□□ 0.38
TOP3BO95985 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.41■□□□□ 0.38
TOP3BO95985 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TOP3BO95985 AC064836.3-201ENST00000607928 673 ntBASIC17.41■□□□□ 0.38
TOP3BO95985 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TOP3BO95985 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP3BO95985 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TOP3BO95985 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TOP3BO95985 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TOP3BO95985 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 AC016396.2-201ENST00000562575 1417 ntBASIC17.4■□□□□ 0.38
TOP3BO95985 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TOP3BO95985 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms