Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.81□□□□□ -0.04
UPK1BO75841 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UPK1BO75841 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.81□□□□□ -0.04
UPK1BO75841 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1BO75841 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 PRAL-201ENST00000624952 3286 ntBASIC14.81□□□□□ -0.04
UPK1BO75841 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UPK1BO75841 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.81□□□□□ -0.04
UPK1BO75841 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.81□□□□□ -0.04
UPK1BO75841 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.81□□□□□ -0.04
UPK1BO75841 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UPK1BO75841 GGT4P-201ENST00000623672 1708 ntBASIC14.8□□□□□ -0.04
UPK1BO75841 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UPK1BO75841 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 SSR4P1-203ENST00000599569 2260 ntBASIC14.8□□□□□ -0.04
UPK1BO75841 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.8□□□□□ -0.04
UPK1BO75841 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.8□□□□□ -0.04
UPK1BO75841 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.8□□□□□ -0.04
UPK1BO75841 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 MIR4674-201ENST00000582457 87 ntBASIC14.8□□□□□ -0.04
UPK1BO75841 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.8□□□□□ -0.04
UPK1BO75841 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.8□□□□□ -0.04
UPK1BO75841 AC130371.2-201ENST00000619443 611 ntBASIC14.8□□□□□ -0.04
UPK1BO75841 AL050303.2-201ENST00000619798 666 ntBASIC14.8□□□□□ -0.04
UPK1BO75841 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.8□□□□□ -0.04
UPK1BO75841 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UPK1BO75841 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
UPK1BO75841 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.8□□□□□ -0.04
UPK1BO75841 LINC00528-201ENST00000600723 2160 ntBASIC14.8□□□□□ -0.04
UPK1BO75841 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.8□□□□□ -0.04
UPK1BO75841 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UPK1BO75841 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1BO75841 TUBB8P12-201ENST00000308911 1335 ntBASIC14.79□□□□□ -0.04
UPK1BO75841 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1BO75841 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms