Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GPC4O75487 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GPC4O75487 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GPC4O75487 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 PRYP5-201ENST00000451909 266 ntBASIC17.06■□□□□ 0.32
GPC4O75487 SIGLEC30P-201ENST00000455569 941 ntBASIC17.06■□□□□ 0.32
GPC4O75487 FGFR3P6-201ENST00000457012 610 ntBASIC17.06■□□□□ 0.32
GPC4O75487 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.06■□□□□ 0.32
GPC4O75487 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.06■□□□□ 0.32
GPC4O75487 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GPC4O75487 PCDHA14-201ENST00000506751 2298 ntBASIC17.06■□□□□ 0.32
GPC4O75487 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GPC4O75487 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 AL135999.2-201ENST00000622438 1686 ntBASIC17.06■□□□□ 0.32
GPC4O75487 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC4O75487 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC4O75487 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GPC4O75487 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GPC4O75487 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.05■□□□□ 0.32
GPC4O75487 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 AC116353.5-201ENST00000638148 1699 ntBASIC17.05■□□□□ 0.32
GPC4O75487 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 AC060834.1-201ENST00000443027 2032 ntBASIC17.05■□□□□ 0.32
GPC4O75487 AC063926.3-201ENST00000624734 5658 ntBASIC17.05■□□□□ 0.32
GPC4O75487 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
GPC4O75487 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.05■□□□□ 0.32
GPC4O75487 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.05■□□□□ 0.32
GPC4O75487 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 AC008608.2-201ENST00000606089 416 ntBASIC17.05■□□□□ 0.32
GPC4O75487 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC4O75487 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC4O75487 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC4O75487 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC4O75487 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 AGGF1P2-201ENST00000426656 2106 ntBASIC17.05■□□□□ 0.32
GPC4O75487 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC4O75487 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC4O75487 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC4O75487 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC4O75487 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GPC4O75487 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms