Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.13■□□□□ 0.97
CACNA1FO60840 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNA1FO60840 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CACNA1FO60840 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CACNA1FO60840 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.13■□□□□ 0.97
CACNA1FO60840 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.13■□□□□ 0.97
CACNA1FO60840 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.13■□□□□ 0.97
CACNA1FO60840 AC027307.2-201ENST00000591252 911 ntBASIC21.13■□□□□ 0.97
CACNA1FO60840 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
CACNA1FO60840 AC020765.3-201ENST00000613051 740 ntBASIC21.13■□□□□ 0.97
CACNA1FO60840 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CACNA1FO60840 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 AL391256.1-201ENST00000443260 1855 ntBASIC21.13■□□□□ 0.97
CACNA1FO60840 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.13■□□□□ 0.97
CACNA1FO60840 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.13■□□□□ 0.97
CACNA1FO60840 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNA1FO60840 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNA1FO60840 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNA1FO60840 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CACNA1FO60840 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CACNA1FO60840 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNA1FO60840 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.12■□□□□ 0.97
CACNA1FO60840 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CACNA1FO60840 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CACNA1FO60840 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CACNA1FO60840 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNA1FO60840 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNA1FO60840 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CACNA1FO60840 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CACNA1FO60840 AL512652.2-201ENST00000625156 1716 ntBASIC21.12■□□□□ 0.97
CACNA1FO60840 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 AC006538.1-201ENST00000567905 1585 ntBASIC21.12■□□□□ 0.97
CACNA1FO60840 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNA1FO60840 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CACNA1FO60840 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNA1FO60840 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNA1FO60840 AC022211.2-201ENST00000585075 2527 ntBASIC21.11■□□□□ 0.97
CACNA1FO60840 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 AC073439.1-201ENST00000624121 1774 ntBASIC21.11■□□□□ 0.97
CACNA1FO60840 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNA1FO60840 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNA1FO60840 AL592309.1-201ENST00000443127 649 ntBASIC21.11■□□□□ 0.97
CACNA1FO60840 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 AC079140.1-201ENST00000508039 487 ntBASIC21.11■□□□□ 0.97
CACNA1FO60840 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNA1FO60840 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.11■□□□□ 0.97
CACNA1FO60840 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.11■□□□□ 0.97
CACNA1FO60840 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.11■□□□□ 0.97
CACNA1FO60840 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.11■□□□□ 0.97
CACNA1FO60840 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.11■□□□□ 0.97
CACNA1FO60840 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CACNA1FO60840 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CACNA1FO60840 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNA1FO60840 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNA1FO60840 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNA1FO60840 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.1■□□□□ 0.97
CACNA1FO60840 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CACNA1FO60840 AC109322.1-201ENST00000524499 1264 ntBASIC21.1■□□□□ 0.97
CACNA1FO60840 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.1■□□□□ 0.97
CACNA1FO60840 AL596442.2-201ENST00000610240 980 ntBASIC21.1■□□□□ 0.97
CACNA1FO60840 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.1■□□□□ 0.97
CACNA1FO60840 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms