Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF11O60813 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF11O60813 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 AC087641.1-201ENST00000557561 1021 ntBASIC17.17■□□□□ 0.34
PRAMEF11O60813 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 AL645728.2-201ENST00000641974 660 ntBASIC17.17■□□□□ 0.34
PRAMEF11O60813 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF11O60813 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 BCAR1-209ENST00000546196 1340 ntBASIC17.17■□□□□ 0.34
PRAMEF11O60813 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF11O60813 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 AC012569.1-201ENST00000591191 1524 ntBASIC17.16■□□□□ 0.34
PRAMEF11O60813 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 KRT19P2-202ENST00000557173 1012 ntBASIC17.16■□□□□ 0.34
PRAMEF11O60813 CYP2A7P1-201ENST00000595391 815 ntBASIC17.16■□□□□ 0.34
PRAMEF11O60813 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 AC106886.4-201ENST00000623557 2502 ntBASIC17.16■□□□□ 0.34
PRAMEF11O60813 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF11O60813 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.16■□□□□ 0.34
PRAMEF11O60813 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 AC078925.2-201ENST00000624013 1973 ntBASIC17.15■□□□□ 0.34
PRAMEF11O60813 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF11O60813 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF11O60813 AC025580.3-201ENST00000617932 1424 ntBASIC17.15■□□□□ 0.34
PRAMEF11O60813 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms