Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 AL136038.4-201ENST00000603606 1261 ntBASIC13.9□□□□□ -0.18
SSSCA1O60232 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SSSCA1O60232 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.9□□□□□ -0.18
SSSCA1O60232 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 AL391807.1-203ENST00000604392 2365 ntBASIC13.9□□□□□ -0.18
SSSCA1O60232 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SSSCA1O60232 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.9□□□□□ -0.18
SSSCA1O60232 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSSCA1O60232 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SSSCA1O60232 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.9□□□□□ -0.19
SSSCA1O60232 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
SSSCA1O60232 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SSSCA1O60232 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.9□□□□□ -0.19
SSSCA1O60232 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.89□□□□□ -0.19
SSSCA1O60232 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SSSCA1O60232 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.89□□□□□ -0.19
SSSCA1O60232 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.89□□□□□ -0.19
SSSCA1O60232 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.89□□□□□ -0.19
SSSCA1O60232 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SSSCA1O60232 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.89□□□□□ -0.19
SSSCA1O60232 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.89□□□□□ -0.19
SSSCA1O60232 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SSSCA1O60232 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.89□□□□□ -0.19
SSSCA1O60232 MIR4785-201ENST00000585005 73 ntBASIC13.89□□□□□ -0.19
SSSCA1O60232 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.89□□□□□ -0.19
SSSCA1O60232 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.89□□□□□ -0.19
SSSCA1O60232 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SSSCA1O60232 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SSSCA1O60232 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 FRMD8P1-201ENST00000440433 1524 ntBASIC13.89□□□□□ -0.19
SSSCA1O60232 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
SSSCA1O60232 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SSSCA1O60232 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSSCA1O60232 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 DBET-201ENST00000630918 3363 ntBASIC13.88□□□□□ -0.19
SSSCA1O60232 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.88□□□□□ -0.19
SSSCA1O60232 GCSHP2-201ENST00000560971 527 ntBASIC13.88□□□□□ -0.19
SSSCA1O60232 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.88□□□□□ -0.19
SSSCA1O60232 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.88□□□□□ -0.19
SSSCA1O60232 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 AC019129.2-201ENST00000609837 1235 ntBASIC13.88□□□□□ -0.19
SSSCA1O60232 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
SSSCA1O60232 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms