Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 FAM210CP-201ENST00000445714 574 ntBASIC15.21■□□□□ 0.03
TVP23AA6NH52 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 AL590326.2-201ENST00000625139 305 ntBASIC15.21■□□□□ 0.03
TVP23AA6NH52 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.21■□□□□ 0.03
TVP23AA6NH52 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TVP23AA6NH52 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.21■□□□□ 0.02
TVP23AA6NH52 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.21■□□□□ 0.02
TVP23AA6NH52 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TVP23AA6NH52 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TVP23AA6NH52 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TVP23AA6NH52 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TVP23AA6NH52 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
TVP23AA6NH52 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TVP23AA6NH52 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
TVP23AA6NH52 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.21■□□□□ 0.02
TVP23AA6NH52 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 AC008741.2-201ENST00000612792 3115 ntBASIC15.2■□□□□ 0.02
TVP23AA6NH52 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 AL020989.1-201ENST00000422979 469 ntBASIC15.2■□□□□ 0.02
TVP23AA6NH52 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 SIGLEC30P-201ENST00000455569 941 ntBASIC15.2■□□□□ 0.02
TVP23AA6NH52 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 AC104819.1-201ENST00000504587 486 ntBASIC15.2■□□□□ 0.02
TVP23AA6NH52 MIR3180-1-201ENST00000580374 94 ntBASIC15.2■□□□□ 0.02
TVP23AA6NH52 MIR3180-3-201ENST00000584616 94 ntBASIC15.2■□□□□ 0.02
TVP23AA6NH52 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 AC114341.1-201ENST00000618070 349 ntBASIC15.2■□□□□ 0.02
TVP23AA6NH52 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TVP23AA6NH52 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TVP23AA6NH52 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TVP23AA6NH52 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.19■□□□□ 0.02
TVP23AA6NH52 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms