Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 AC106730.1-201ENST00000566722 1090 ntBASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 AC103702.1-201ENST00000548801 2630 ntBASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SMIM9A6NGZ8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 VN2R19P-201ENST00000442399 1052 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AC009947.1-201ENST00000444350 727 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AC087163.2-201ENST00000457299 853 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 MIR4751-201ENST00000578027 74 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AL662844.4-201ENST00000606367 2838 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 AC092850.2-201ENST00000623821 2697 ntBASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SMIM9A6NGZ8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 AC104109.2-201ENST00000602919 1418 ntBASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms