Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 AC010336.2-201ENST00000564226 506 ntBASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 AC021097.1-201ENST00000607902 574 ntBASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 HLA-H-201ENST00000383620 1096 ntBASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 AC009477.1-201ENST00000452936 217 ntBASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 IGHV3-72-202ENST00000621503 303 ntBASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
MTCL1Q9Y4B5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 AC007613.1-201ENST00000572811 2597 ntBASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 AC073439.1-201ENST00000624121 1774 ntBASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 GAPDHP21-201ENST00000450301 1010 ntBASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 RNA5SP410-201ENST00000516285 106 ntBASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 AC027307.3-201ENST00000594262 1100 ntBASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 AL132655.2-201ENST00000596276 594 ntBASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTCL1Q9Y4B5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 MTND6P24-201ENST00000440466 518 ntBASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 HLA-J-202ENST00000469281 1241 ntBASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 AL133215.2-201ENST00000609242 977 ntBASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 AL844908.2-201ENST00000609461 460 ntBASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTCL1Q9Y4B5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MTCL1Q9Y4B5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTCL1Q9Y4B5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTCL1Q9Y4B5 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTCL1Q9Y4B5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTCL1Q9Y4B5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTCL1Q9Y4B5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.42■□□□□ 0.38
MTCL1Q9Y4B5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms