Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AC097637.2-201ENST00000624096 1997 ntBASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 UPK3BP1-201ENST00000428678 509 ntBASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 KRT16P4-201ENST00000453883 522 ntBASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AC132008.2-207ENST00000454517 770 ntBASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 FOSL1P1-201ENST00000511041 816 ntBASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AC078925.2-201ENST00000624013 1973 ntBASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 SIGLEC16-201ENST00000599858 1437 ntBASIC16.62■□□□□ 0.25
RNF11Q9Y3C5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 AC079776.2-201ENST00000641154 1609 ntBASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 AP001269.4-201ENST00000609611 512 ntBASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF11Q9Y3C5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms