Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRDM9Q9NQV7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 AP000347.1-202ENST00000435868 847 ntBASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 PRSS29P-201ENST00000440800 595 ntBASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 MIR4751-201ENST00000578027 74 ntBASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 CFTRP2-201ENST00000634304 199 ntBASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRDM9Q9NQV7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 KRT8P49-201ENST00000604166 1432 ntBASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 AC004790.2-201ENST00000623588 572 ntBASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.06■□□□□ 0.16
PRDM9Q9NQV7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 CRYGEP-201ENST00000412192 528 ntBASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.05■□□□□ 0.16
PRDM9Q9NQV7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms