Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 AC004898.1-201ENST00000451057 766 ntBASIC15.55■□□□□ 0.08
CHD8Q9HCK8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD8Q9HCK8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 AC091804.1-201ENST00000486888 567 ntBASIC15.54■□□□□ 0.08
CHD8Q9HCK8 SCARNA20.5-201ENST00000516991 142 ntBASIC15.54■□□□□ 0.08
CHD8Q9HCK8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHD8Q9HCK8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AKR7A2P1-201ENST00000460134 915 ntBASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 PRYP6-201ENST00000514804 343 ntBASIC15.53■□□□□ 0.08
CHD8Q9HCK8 DUX4L45-201ENST00000566406 1057 ntBASIC15.53■□□□□ 0.08
CHD8Q9HCK8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD8Q9HCK8 AL020996.1-203ENST00000536896 2307 ntBASIC15.53■□□□□ 0.08
CHD8Q9HCK8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 AC079316.1-201ENST00000548397 411 ntBASIC15.52■□□□□ 0.08
CHD8Q9HCK8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.52■□□□□ 0.08
CHD8Q9HCK8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms