Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.07■□□□□ 0
MMP28Q9H239 AC141257.4-201ENST00000634557 245 ntBASIC15.07■□□□□ 0
MMP28Q9H239 AC136944.6-201ENST00000634818 245 ntBASIC15.07■□□□□ 0
MMP28Q9H239 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.07■□□□□ 0
MMP28Q9H239 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
MMP28Q9H239 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
MMP28Q9H239 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.06■□□□□ 0
MMP28Q9H239 AC104390.1-201ENST00000555663 520 ntBASIC15.06■□□□□ 0
MMP28Q9H239 AC087388.1-201ENST00000571370 1112 ntBASIC15.06■□□□□ 0
MMP28Q9H239 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.06■□□□□ 0
MMP28Q9H239 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 AL138966.2-201ENST00000621997 464 ntBASIC15.06■□□□□ 0
MMP28Q9H239 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MMP28Q9H239 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.06■□□□□ 0
MMP28Q9H239 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.06■□□□□ 0
MMP28Q9H239 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.06■□□□□ 0
MMP28Q9H239 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MMP28Q9H239 AC009949.1-201ENST00000623048 1830 ntBASIC15.06■□□□□ 0
MMP28Q9H239 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
MMP28Q9H239 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
MMP28Q9H239 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.05■□□□□ 0
MMP28Q9H239 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.05■□□□□ 0
MMP28Q9H239 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.05■□□□□ -0
MMP28Q9H239 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.05■□□□□ -0
MMP28Q9H239 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms