Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TSSC2-201ENST00000450217 709 ntBASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 FAM86EP-206ENST00000510506 987 ntBASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 AP005901.3-202ENST00000581653 237 ntBASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 AC116407.4-201ENST00000623319 1061 ntBASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 CICP6-201ENST00000457191 2729 ntBASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
POLR2J3Q9H1A7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 KRT18P1-202ENST00000452408 1331 ntBASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 POM121L3P-201ENST00000419331 1163 ntBASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SIGLEC30P-201ENST00000455569 941 ntBASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 MINOS1P3-201ENST00000457048 203 ntBASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 AC091607.1-201ENST00000490318 1060 ntBASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
POLR2J3Q9H1A7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 LINC02199-201ENST00000506655 2702 ntBASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 AL020989.1-201ENST00000422979 469 ntBASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
POLR2J3Q9H1A7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms