Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 GALNT2-203ENST00000488903 593 ntTSL 224.23■■□□□ 1.471e-6■□□□□ 11.3
CSTF2TQ9H0L4 CYC1-204ENST00000533444 1832 ntTSL 1 (best)24.07■■□□□ 1.445e-11■□□□□ 11.3
CSTF2TQ9H0L4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.447e-6■□□□□ 11.3
CSTF2TQ9H0L4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.147e-6■□□□□ 11.3
CSTF2TQ9H0L4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.057e-6■□□□□ 11.3
CSTF2TQ9H0L4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.017e-6■□□□□ 11.3
CSTF2TQ9H0L4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.997e-6■□□□□ 11.3
CSTF2TQ9H0L4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.68■□□□□ 0.97e-6■□□□□ 11.3
CSTF2TQ9H0L4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.885e-11■□□□□ 11.3
CSTF2TQ9H0L4 PKD1-221ENST00000488185 737 ntTSL 519.14■□□□□ 0.657e-6■□□□□ 11.3
CSTF2TQ9H0L4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.51■□□□□ 0.557e-6■□□□□ 11.3
CSTF2TQ9H0L4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.371e-6■□□□□ 11.3
CSTF2TQ9H0L4 CYC1-203ENST00000528618 831 ntTSL 517.22■□□□□ 0.355e-11■□□□□ 11.3
CSTF2TQ9H0L4 PKD1-235ENST00000568591 2545 ntTSL 216.91■□□□□ 0.37e-6■□□□□ 11.3
CSTF2TQ9H0L4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.82■□□□□ 0.287e-6■□□□□ 11.3
CSTF2TQ9H0L4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.267e-6■□□□□ 11.3
CSTF2TQ9H0L4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.65□□□□□ -0.067e-11■□□□□ 11.3
CSTF2TQ9H0L4 MYDGF-202ENST00000596031 335 ntTSL 313.61□□□□□ -0.237e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKT2-205ENST00000392037 681 ntTSL 213.43□□□□□ -0.267e-6■□□□□ 11.3
CSTF2TQ9H0L4 NUBP1-203ENST00000571175 674 ntTSL 213.13□□□□□ -0.317e-6■□□□□ 11.3
CSTF2TQ9H0L4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.357e-6■□□□□ 11.3
CSTF2TQ9H0L4 GALNT2-205ENST00000494106 692 ntTSL 512.83□□□□□ -0.361e-6■□□□□ 11.3
CSTF2TQ9H0L4 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.377e-6■□□□□ 11.3
CSTF2TQ9H0L4 NUBP1-204ENST00000571790 1137 ntTSL 1 (best)12.57□□□□□ -0.47e-6■□□□□ 11.3
CSTF2TQ9H0L4 ITM2C-209ENST00000543957 573 ntTSL 511.68□□□□□ -0.547e-6■□□□□ 11.3
CSTF2TQ9H0L4 MYDGF-204ENST00000599761 463 ntTSL 311.67□□□□□ -0.547e-6■□□□□ 11.3
CSTF2TQ9H0L4 NUBP1-201ENST00000283027 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.627e-6■□□□□ 11.3
CSTF2TQ9H0L4 NUBP1-208ENST00000574691 517 ntTSL 510.61□□□□□ -0.717e-6■□□□□ 11.3
CSTF2TQ9H0L4 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC10.24□□□□□ -0.777e-6■□□□□ 11.3
CSTF2TQ9H0L4 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC8.3□□□□□ -1.087e-6■□□□□ 11.3
CSTF2TQ9H0L4 SLC35F5-209ENST00000469702 784 ntTSL 37.98□□□□□ -1.137e-6■□□□□ 11.3
CSTF2TQ9H0L4 ITPR2-209ENST00000545235 540 ntTSL 1 (best)7.94□□□□□ -1.147e-6■□□□□ 11.3
CSTF2TQ9H0L4 FOXN3-208ENST00000555034 505 ntTSL 37.3□□□□□ -1.247e-6■□□□□ 11.3
CSTF2TQ9H0L4 FOXN3-205ENST00000553904 337 ntTSL 36.19□□□□□ -1.427e-6■□□□□ 11.3
CSTF2TQ9H0L4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.62□□□□□ -1.511e-323■□□□□ 11.3
CSTF2TQ9H0L4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.341e-6■□□□□ 11.3
CSTF2TQ9H0L4 COX20-205ENST00000498262 2290 ntTSL 215.78■□□□□ 0.121e-6■□□□□ 11.3
CSTF2TQ9H0L4 COX20-202ENST00000391839 1005 ntTSL 1 (best)13.87□□□□□ -0.191e-6■□□□□ 11.3
CSTF2TQ9H0L4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.068e-12■□□□□ 11.3
CSTF2TQ9H0L4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.888e-12■□□□□ 11.3
CSTF2TQ9H0L4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.358e-12■□□□□ 11.3
CSTF2TQ9H0L4 HNRNPD-211ENST00000514671 1089 ntTSL 59.19□□□□□ -0.948e-12■□□□□ 11.3
CSTF2TQ9H0L4 HNRNPD-210ENST00000514325 4597 ntTSL 1 (best)4.23□□□□□ -1.738e-12■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.32■■□□□ 1.484e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.31■■□□□ 1.164e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-203ENST00000594594 2251 ntTSL 521.22■□□□□ 0.994e-6■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.58■□□□□ 0.734e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-216ENST00000599488 514 ntTSL 418.44■□□□□ 0.544e-6■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.434e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.424e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-220ENST00000609519 2113 ntTSL 217.48■□□□□ 0.394e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-215ENST00000599137 608 ntTSL 417.26■□□□□ 0.354e-6■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-212ENST00000526758 594 ntTSL 416.42■□□□□ 0.224e-6■□□□□ 11.3
CSTF2TQ9H0L4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.214e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-202ENST00000593845 2749 ntTSL 216.32■□□□□ 0.24e-6■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.124e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-207ENST00000595136 531 ntTSL 415.73■□□□□ 0.114e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-204ENST00000594893 1453 ntTSL 215.55■□□□□ 0.084e-6■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-209ENST00000461611 643 ntTSL 315.04■□□□□ -04e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.64□□□□□ -0.073e-10■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-213ENST00000531240 559 ntTSL 414.55□□□□□ -0.084e-6■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-208ENST00000440228 620 ntTSL 414.52□□□□□ -0.094e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-211ENST00000596213 929 ntTSL 313.75□□□□□ -0.214e-6■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-212ENST00000556400 604 ntTSL 213.4□□□□□ -0.264e-6■□□□□ 11.3
CSTF2TQ9H0L4 AC215219.1-201ENST00000400706 1817 ntBASIC13.12□□□□□ -0.314e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-205ENST00000595067 548 ntTSL 412.71□□□□□ -0.374e-6■□□□□ 11.3
CSTF2TQ9H0L4 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.394e-6■□□□□ 11.3
CSTF2TQ9H0L4 RELT-207ENST00000545886 4346 ntTSL 212.45□□□□□ -0.424e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-218ENST00000600247 583 ntTSL 411.87□□□□□ -0.514e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.633e-10■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-210ENST00000479364 1010 ntTSL 511.07□□□□□ -0.643e-10■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC11.05□□□□□ -0.644e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC10.7□□□□□ -0.73e-10■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-201ENST00000551597 507 ntTSL 1 (best)10.67□□□□□ -0.74e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-213ENST00000597994 470 ntTSL 410.63□□□□□ -0.714e-6■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-209ENST00000555707 1983 ntTSL 1 (best)10.54□□□□□ -0.724e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC9.77□□□□□ -0.853e-10■□□□□ 11.3
CSTF2TQ9H0L4 ACBD6-204ENST00000475338 964 ntTSL 59.72□□□□□ -0.854e-6■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-205ENST00000554378 741 ntTSL 1 (best)9.46□□□□□ -0.94e-6■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC9.12□□□□□ -0.954e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC8.93□□□□□ -0.983e-10■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC8.65□□□□□ -1.024e-6■□□□□ 11.3
CSTF2TQ9H0L4 ACBD6-205ENST00000496993 672 ntTSL 58.38□□□□□ -1.074e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.3□□□□□ -1.083e-10■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.21□□□□□ -1.093e-10■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC8.14□□□□□ -1.114e-6■□□□□ 11.3
CSTF2TQ9H0L4 AKAP8L-210ENST00000596195 553 ntTSL 47.83□□□□□ -1.164e-6■□□□□ 11.3
CSTF2TQ9H0L4 C14orf37-203ENST00000554218 572 ntTSL 47.38□□□□□ -1.234e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-214ENST00000496712 603 ntTSL 37.1□□□□□ -1.274e-6■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.06□□□□□ -1.284e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.7□□□□□ -1.343e-10■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-203ENST00000554309 597 ntTSL 36.47□□□□□ -1.374e-6■□□□□ 11.3
CSTF2TQ9H0L4 PSMA3-AS1-202ENST00000553657 398 ntTSL 36.18□□□□□ -1.424e-6■□□□□ 11.3
CSTF2TQ9H0L4 NFIA-209ENST00000476646 730 ntTSL 34.46□□□□□ -1.73e-10■□□□□ 11.3
CSTF2TQ9H0L4 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.633e-8■□□□□ 11.3
CSTF2TQ9H0L4 YY1AP1-216ENST00000442834 2508 ntTSL 29.66□□□□□ -0.863e-8■□□□□ 11.3
CSTF2TQ9H0L4 AL353807.3-201ENST00000500626 2505 ntBASIC8.1□□□□□ -1.113e-8■□□□□ 11.3
CSTF2TQ9H0L4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.02■□□□□ 0.641e-13■□□□□ 11.3
CSTF2TQ9H0L4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.78■□□□□ 0.441e-13■□□□□ 11.3
CSTF2TQ9H0L4 HAGLR-201ENST00000413969 545 ntTSL 315.77■□□□□ 0.121e-13■□□□□ 11.3
Retrieved 100 of 19,151 protein–RNA pairs in 169.2 ms