Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 AC073592.4-201ENST00000623827 446 ntBASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHACTR1Q9C0D0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHACTR1Q9C0D0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 AC148477.5-201ENST00000625164 1645 ntBASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 NTF6B-201ENST00000591913 560 ntBASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 LINC02199-201ENST00000506655 2702 ntBASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHACTR1Q9C0D0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHACTR1Q9C0D0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.24■□□□□ 0.35
PHACTR1Q9C0D0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHACTR1Q9C0D0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.24■□□□□ 0.35
PHACTR1Q9C0D0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHACTR1Q9C0D0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.24■□□□□ 0.35
PHACTR1Q9C0D0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms