Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 AC055876.3-201ENST00000431496 288 ntBASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 KLF2P3-201ENST00000451977 1087 ntBASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 AP000842.3-202ENST00000569238 1080 ntBASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 AC138649.4-201ENST00000612222 287 ntBASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC46A2Q9BY10 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 AC108860.2-201ENST00000562760 2183 ntBASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC46A2Q9BY10 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.38
SLC46A2Q9BY10 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SLC46A2Q9BY10 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLC46A2Q9BY10 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLC46A2Q9BY10 AL133373.2-201ENST00000623187 2828 ntBASIC17.39■□□□□ 0.38
SLC46A2Q9BY10 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 AC092053.1-201ENST00000605787 1936 ntBASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 MIR943-201ENST00000401286 94 ntBASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 AC093214.1-201ENST00000511688 1107 ntBASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 ALG1L8P-201ENST00000533887 760 ntBASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC46A2Q9BY10 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC46A2Q9BY10 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms