Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AC009533.2-201ENST00000543664 586 ntBASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AC011467.2-201ENST00000598425 242 ntBASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 LINC01023-201ENST00000606054 436 ntBASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AD001527.2-201ENST00000622994 785 ntBASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.39□□□□□ -0.11
HDHD3Q9BSH5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.38□□□□□ -0.11
HDHD3Q9BSH5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 AC246785.2-201ENST00000432512 513 ntBASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 AL136038.3-201ENST00000561909 1096 ntBASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 NTF6B-201ENST00000591913 560 ntBASIC14.37□□□□□ -0.11
HDHD3Q9BSH5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms