Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLF1Q9BQI6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 AC004835.2-201ENST00000603762 682 ntBASIC19.71■□□□□ 0.75
SLF1Q9BQI6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 AC141586.5-201ENST00000624546 2050 ntBASIC19.71■□□□□ 0.75
SLF1Q9BQI6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLF1Q9BQI6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 AL121761.2-201ENST00000598007 1648 ntBASIC19.7■□□□□ 0.74
SLF1Q9BQI6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 AC004461.1-201ENST00000412461 403 ntBASIC19.7■□□□□ 0.74
SLF1Q9BQI6 AC140658.5-201ENST00000438532 169 ntBASIC19.7■□□□□ 0.74
SLF1Q9BQI6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 RFPL4AP1-201ENST00000530883 850 ntBASIC19.7■□□□□ 0.74
SLF1Q9BQI6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.7■□□□□ 0.74
SLF1Q9BQI6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLF1Q9BQI6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 ADH5P3-201ENST00000433842 1137 ntBASIC19.69■□□□□ 0.74
SLF1Q9BQI6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 MIR4515-201ENST00000584082 81 ntBASIC19.69■□□□□ 0.74
SLF1Q9BQI6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.69■□□□□ 0.74
SLF1Q9BQI6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms