Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.75■□□□□ 0.43
SMOQ99835 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.75■□□□□ 0.43
SMOQ99835 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.75■□□□□ 0.43
SMOQ99835 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.75■□□□□ 0.43
SMOQ99835 CYP2A7P1-201ENST00000595391 815 ntBASIC17.75■□□□□ 0.43
SMOQ99835 AC092902.6-201ENST00000641783 218 ntBASIC17.75■□□□□ 0.43
SMOQ99835 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.75■□□□□ 0.43
SMOQ99835 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SMOQ99835 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMOQ99835 AC080080.1-201ENST00000625121 2420 ntBASIC17.74■□□□□ 0.43
SMOQ99835 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.74■□□□□ 0.43
SMOQ99835 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.74■□□□□ 0.43
SMOQ99835 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SMOQ99835 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
SMOQ99835 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.74■□□□□ 0.43
SMOQ99835 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SMOQ99835 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.74■□□□□ 0.43
SMOQ99835 MIR4469-201ENST00000583919 79 ntBASIC17.74■□□□□ 0.43
SMOQ99835 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
SMOQ99835 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.74■□□□□ 0.43
SMOQ99835 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SMOQ99835 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SMOQ99835 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.74■□□□□ 0.43
SMOQ99835 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMOQ99835 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMOQ99835 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 AC006277.1-201ENST00000624348 1610 ntBASIC17.73■□□□□ 0.43
SMOQ99835 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.73■□□□□ 0.43
SMOQ99835 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.73■□□□□ 0.43
SMOQ99835 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMOQ99835 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.73■□□□□ 0.43
SMOQ99835 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMOQ99835 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMOQ99835 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.72■□□□□ 0.43
SMOQ99835 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
SMOQ99835 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
SMOQ99835 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.72■□□□□ 0.43
SMOQ99835 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 AC005915.1-201ENST00000624912 2018 ntBASIC17.72■□□□□ 0.43
SMOQ99835 AL645728.1-201ENST00000366221 2101 ntBASIC17.72■□□□□ 0.43
SMOQ99835 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SMOQ99835 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMOQ99835 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms