Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAD9AQ99638 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.99■□□□□ 0.47
RAD9AQ99638 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.99■□□□□ 0.47
RAD9AQ99638 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.99■□□□□ 0.47
RAD9AQ99638 AC140912.1-201ENST00000577171 1054 ntBASIC17.99■□□□□ 0.47
RAD9AQ99638 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.99■□□□□ 0.47
RAD9AQ99638 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 AL132655.2-201ENST00000596276 594 ntBASIC17.99■□□□□ 0.47
RAD9AQ99638 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RAD9AQ99638 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RAD9AQ99638 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAD9AQ99638 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAD9AQ99638 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 HLA-H-201ENST00000383620 1096 ntBASIC17.98■□□□□ 0.47
RAD9AQ99638 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RAD9AQ99638 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.98■□□□□ 0.47
RAD9AQ99638 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.98■□□□□ 0.47
RAD9AQ99638 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.98■□□□□ 0.47
RAD9AQ99638 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.98■□□□□ 0.47
RAD9AQ99638 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 API5-211ENST00000534695 560 ntTSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.98■□□□□ 0.47
RAD9AQ99638 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.98■□□□□ 0.47
RAD9AQ99638 AC008738.7-201ENST00000609744 511 ntBASIC17.98■□□□□ 0.47
RAD9AQ99638 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.98■□□□□ 0.47
RAD9AQ99638 TEX28P1-201ENST00000613479 1221 ntBASIC17.98■□□□□ 0.47
RAD9AQ99638 TEX28P2-201ENST00000617764 1221 ntBASIC17.98■□□□□ 0.47
RAD9AQ99638 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.98■□□□□ 0.47
RAD9AQ99638 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.98■□□□□ 0.47
RAD9AQ99638 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RAD9AQ99638 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.98■□□□□ 0.47
RAD9AQ99638 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.98■□□□□ 0.47
RAD9AQ99638 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAD9AQ99638 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
RAD9AQ99638 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.98■□□□□ 0.47
RAD9AQ99638 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
RAD9AQ99638 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAD9AQ99638 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RAD9AQ99638 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAD9AQ99638 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAD9AQ99638 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAD9AQ99638 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAD9AQ99638 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAD9AQ99638 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.97■□□□□ 0.47
RAD9AQ99638 AL353705.2-201ENST00000428243 662 ntBASIC17.97■□□□□ 0.47
RAD9AQ99638 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.97■□□□□ 0.47
RAD9AQ99638 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.97■□□□□ 0.47
RAD9AQ99638 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RAD9AQ99638 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.97■□□□□ 0.47
RAD9AQ99638 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.97■□□□□ 0.47
RAD9AQ99638 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAD9AQ99638 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.97■□□□□ 0.47
RAD9AQ99638 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.97■□□□□ 0.47
RAD9AQ99638 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms