Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 DDX43P3-201ENST00000441064 443 ntBASIC12.93□□□□□ -0.34
AP1S3Q96PC3 AL355355.2-201ENST00000442321 338 ntBASIC12.93□□□□□ -0.34
AP1S3Q96PC3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 AL353719.1-201ENST00000566847 864 ntBASIC12.93□□□□□ -0.34
AP1S3Q96PC3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.93□□□□□ -0.34
AP1S3Q96PC3 AL359736.2-201ENST00000621992 437 ntBASIC12.93□□□□□ -0.34
AP1S3Q96PC3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP1S3Q96PC3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 AC105020.1-201ENST00000435356 2205 ntBASIC12.92□□□□□ -0.34
AP1S3Q96PC3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 AL662844.4-201ENST00000606367 2838 ntBASIC12.92□□□□□ -0.34
AP1S3Q96PC3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 REXO1L10P-201ENST00000615707 1290 ntBASIC12.92□□□□□ -0.34
AP1S3Q96PC3 REXO1L12P-201ENST00000622156 912 ntBASIC12.92□□□□□ -0.34
AP1S3Q96PC3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 PTENP1-202ENST00000532280 3996 ntBASIC12.92□□□□□ -0.34
AP1S3Q96PC3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
AP1S3Q96PC3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.91□□□□□ -0.34
AP1S3Q96PC3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 AL023803.3-201ENST00000615559 522 ntBASIC12.91□□□□□ -0.34
AP1S3Q96PC3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP1S3Q96PC3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms