Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 EMBP1-201ENST00000458200 901 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 RPS15P9-201ENST00000494093 319 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AC136632.2-201ENST00000512891 861 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AC091167.2-201ENST00000579581 588 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 MPDU1-223ENST00000582151 728 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AC008735.5-201ENST00000623544 497 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 TP73-AS1-207ENST00000624167 988 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 AC018695.7-201ENST00000624587 2492 ntBASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM5Q96HC4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 AC092171.3-201ENST00000610122 2651 ntBASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 FAM197Y8-203ENST00000450145 560 ntBASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 AC008667.4-201ENST00000607370 168 ntBASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 PGM5P2-202ENST00000637225 1043 ntBASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM5Q96HC4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms