Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 SLC25A6P5-201ENST00000435663 894 ntBASIC21.53■■□□□ 1.04
SMARCC1Q92922 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 U91328.1-201ENST00000437528 223 ntBASIC21.53■■□□□ 1.04
SMARCC1Q92922 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 PRYP6-201ENST00000514804 343 ntBASIC21.53■■□□□ 1.04
SMARCC1Q92922 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SMARCC1Q92922 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.53■■□□□ 1.04
SMARCC1Q92922 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC1Q92922 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC1Q92922 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC1Q92922 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC1Q92922 AC098614.1-201ENST00000368528 745 ntBASIC21.52■■□□□ 1.04
SMARCC1Q92922 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 FAM220BP-201ENST00000377689 816 ntBASIC21.52■■□□□ 1.04
SMARCC1Q92922 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 API5-211ENST00000534695 560 ntTSL 5 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 AC140912.1-201ENST00000577171 1054 ntBASIC21.52■■□□□ 1.04
SMARCC1Q92922 AL132655.2-201ENST00000596276 594 ntBASIC21.52■■□□□ 1.04
SMARCC1Q92922 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 AL844908.2-201ENST00000609461 460 ntBASIC21.52■■□□□ 1.04
SMARCC1Q92922 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.52■■□□□ 1.04
SMARCC1Q92922 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SMARCC1Q92922 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.52■■□□□ 1.03
SMARCC1Q92922 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCC1Q92922 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.52■■□□□ 1.03
SMARCC1Q92922 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCC1Q92922 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SMARCC1Q92922 AC007541.1-201ENST00000570282 1469 ntBASIC21.52■■□□□ 1.03
SMARCC1Q92922 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 AL355312.1-201ENST00000407115 2176 ntBASIC21.51■■□□□ 1.03
SMARCC1Q92922 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 GPR53P-205ENST00000457298 1084 ntBASIC21.51■■□□□ 1.03
SMARCC1Q92922 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMARCC1Q92922 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 AC098818.2-201ENST00000564925 2320 ntBASIC21.51■■□□□ 1.03
SMARCC1Q92922 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.51■■□□□ 1.03
SMARCC1Q92922 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC1Q92922 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC1Q92922 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC1Q92922 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC1Q92922 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC1Q92922 AC016396.2-201ENST00000562575 1417 ntBASIC21.5■■□□□ 1.03
SMARCC1Q92922 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMARCC1Q92922 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.5■■□□□ 1.03
SMARCC1Q92922 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms