Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
HPS1Q92902 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
HPS1Q92902 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
HPS1Q92902 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
HPS1Q92902 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
HPS1Q92902 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS1Q92902 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
HPS1Q92902 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.64■□□□□ 0.09
HPS1Q92902 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HPS1Q92902 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 HBZP1-201ENST00000354915 429 ntBASIC15.64■□□□□ 0.09
HPS1Q92902 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS1Q92902 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS1Q92902 AC104390.1-201ENST00000555663 520 ntBASIC15.64■□□□□ 0.09
HPS1Q92902 AC092068.3-201ENST00000587894 2016 ntBASIC15.64■□□□□ 0.09
HPS1Q92902 AC024243.1-201ENST00000609234 778 ntBASIC15.64■□□□□ 0.09
HPS1Q92902 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS1Q92902 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.64■□□□□ 0.09
HPS1Q92902 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HPS1Q92902 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
HPS1Q92902 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS1Q92902 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.64■□□□□ 0.09
HPS1Q92902 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
HPS1Q92902 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HPS1Q92902 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS1Q92902 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS1Q92902 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS1Q92902 ATP5G2P1-201ENST00000433580 426 ntBASIC15.63■□□□□ 0.09
HPS1Q92902 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.63■□□□□ 0.09
HPS1Q92902 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS1Q92902 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS1Q92902 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.63■□□□□ 0.09
HPS1Q92902 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.63■□□□□ 0.09
HPS1Q92902 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.63■□□□□ 0.09
HPS1Q92902 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.63■□□□□ 0.09
HPS1Q92902 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HPS1Q92902 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HPS1Q92902 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HPS1Q92902 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HPS1Q92902 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms