Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 NKAIN1P1-201ENST00000435754 582 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 SUPT4H1P2-201ENST00000501248 353 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 LINC00896-202ENST00000609602 2128 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AL589987.1-201ENST00000453380 819 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AC087072.1-201ENST00000603727 421 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AL512324.3-201ENST00000619383 882 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 AL499627.1-201ENST00000569373 2188 ntBASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNE2Q8WXH0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 MIR769-201ENST00000390225 118 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 HNRNPA1P42-201ENST00000458678 957 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC021016.3-201ENST00000608367 477 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC026310.3-201ENST00000625186 2373 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC092337.1-201ENST00000568699 1129 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC024681.1-201ENST00000521917 487 ntBASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNE2Q8WXH0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms