Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC021087.4-201ENST00000563761 564 ntBASIC16.63■□□□□ 0.25
ATL1Q8WXF7 AC004706.3-202ENST00000621574 984 ntBASIC16.63■□□□□ 0.25
ATL1Q8WXF7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATL1Q8WXF7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 UNC93B7-201ENST00000509439 705 ntBASIC16.62■□□□□ 0.25
ATL1Q8WXF7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.62■□□□□ 0.25
ATL1Q8WXF7 AC025062.2-201ENST00000605477 670 ntBASIC16.62■□□□□ 0.25
ATL1Q8WXF7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.62■□□□□ 0.25
ATL1Q8WXF7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 AC092068.3-201ENST00000587894 2016 ntBASIC16.62■□□□□ 0.25
ATL1Q8WXF7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATL1Q8WXF7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 TERC-201ENST00000602385 541 ntBASIC16.61■□□□□ 0.25
ATL1Q8WXF7 AL121912.1-201ENST00000603683 238 ntBASIC16.61■□□□□ 0.25
ATL1Q8WXF7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 AL691432.3-201ENST00000621860 400 ntBASIC16.61■□□□□ 0.25
ATL1Q8WXF7 AC107918.4-202ENST00000641623 219 ntBASIC16.61■□□□□ 0.25
ATL1Q8WXF7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 AC243591.1-201ENST00000452967 1364 ntBASIC16.61■□□□□ 0.25
ATL1Q8WXF7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 AC105020.1-201ENST00000435356 2205 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms