Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.36□□□□□ -0.11
RTN4IP1Q8WWV3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AL662844.4-201ENST00000606367 2838 ntBASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AC125634.1-201ENST00000438758 1403 ntBASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 MYCLP1-201ENST00000372451 1075 ntBASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AC005336.2-201ENST00000593183 939 ntBASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AL138831.2-201ENST00000606564 490 ntBASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.35□□□□□ -0.11
RTN4IP1Q8WWV3 AC010460.3-201ENST00000511359 1579 ntBASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTN4IP1Q8WWV3 AC007967.3-201ENST00000434308 558 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms