Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
STAG1Q8WVM7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
STAG1Q8WVM7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
STAG1Q8WVM7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.95■□□□□ 0.78
STAG1Q8WVM7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.95■□□□□ 0.78
STAG1Q8WVM7 AC006277.1-201ENST00000624348 1610 ntBASIC19.94■□□□□ 0.78
STAG1Q8WVM7 AL645728.1-201ENST00000366221 2101 ntBASIC19.94■□□□□ 0.78
STAG1Q8WVM7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 AC022211.2-201ENST00000585075 2527 ntBASIC19.94■□□□□ 0.78
STAG1Q8WVM7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 AL691403.2-201ENST00000618460 490 ntBASIC19.94■□□□□ 0.78
STAG1Q8WVM7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.94■□□□□ 0.78
STAG1Q8WVM7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 AC012569.1-201ENST00000591191 1524 ntBASIC19.93■□□□□ 0.78
STAG1Q8WVM7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 HMGA1P7-201ENST00000406908 502 ntBASIC19.93■□□□□ 0.78
STAG1Q8WVM7 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 AC087641.1-201ENST00000557561 1021 ntBASIC19.93■□□□□ 0.78
STAG1Q8WVM7 AL031432.2-201ENST00000566714 459 ntBASIC19.93■□□□□ 0.78
STAG1Q8WVM7 AL928711.1-201ENST00000570165 459 ntBASIC19.93■□□□□ 0.78
STAG1Q8WVM7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.93■□□□□ 0.78
STAG1Q8WVM7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 AP002490.2-201ENST00000524791 560 ntBASIC19.92■□□□□ 0.78
STAG1Q8WVM7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.92■□□□□ 0.78
STAG1Q8WVM7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
STAG1Q8WVM7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.91■□□□□ 0.78
STAG1Q8WVM7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
STAG1Q8WVM7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
STAG1Q8WVM7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
STAG1Q8WVM7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms