Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AC131009.4-201ENST00000624048 1740 ntBASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 MIR4492-201ENST00000581627 80 ntBASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 WFDC1-204ENST00000613603 549 ntBASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
ALMS1Q8TCU4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 HAUS4P1-201ENST00000406739 1145 ntBASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AC108725.1-201ENST00000495472 409 ntBASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 WIZP1-201ENST00000531444 2299 ntBASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC11.24□□□□□ -0.61
ALMS1Q8TCU4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms