Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 AD000864.1-201ENST00000624076 2295 ntBASIC17.99■□□□□ 0.47
UBA3Q8TBC4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 AC145285.3-201ENST00000564603 959 ntBASIC17.99■□□□□ 0.47
UBA3Q8TBC4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA3Q8TBC4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 AC106886.4-201ENST00000623557 2502 ntBASIC17.98■□□□□ 0.47
UBA3Q8TBC4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA3Q8TBC4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 CRYGEP-201ENST00000412192 528 ntBASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 AC007967.2-201ENST00000432613 625 ntBASIC17.97■□□□□ 0.47
UBA3Q8TBC4 AP000347.1-202ENST00000435868 847 ntBASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 VN2R19P-201ENST00000442399 1052 ntBASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 AC106730.1-201ENST00000566722 1090 ntBASIC17.97■□□□□ 0.47
UBA3Q8TBC4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 REXO1L3P-201ENST00000622202 1288 ntBASIC17.97■□□□□ 0.47
UBA3Q8TBC4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA3Q8TBC4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms