Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUP43Q8NFH3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 PCDHA14-201ENST00000506751 2298 ntBASIC15.91■□□□□ 0.14
NUP43Q8NFH3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUP43Q8NFH3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NUP43Q8NFH3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms