Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC005593.1-201ENST00000624894 515 ntBASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.24■□□□□ 0.19
SRFBP1Q8NEF9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 AC073621.1-201ENST00000392730 636 ntBASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRFBP1Q8NEF9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AL031284.1-201ENST00000419297 478 ntBASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 HNRNPDP1-201ENST00000439535 754 ntBASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 RPS15P9-201ENST00000494093 319 ntBASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AL356488.2-201ENST00000602755 427 ntBASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 FAM215A-202ENST00000632077 792 ntBASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRFBP1Q8NEF9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms