Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC26.22■■□□□ 1.79
CFAP43Q8NDM7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CFAP43Q8NDM7 MIR346-201ENST00000362234 95 ntBASIC26.22■■□□□ 1.79
CFAP43Q8NDM7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC26.22■■□□□ 1.79
CFAP43Q8NDM7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
CFAP43Q8NDM7 FOXO1B-201ENST00000504678 1527 ntBASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 AL844908.2-201ENST00000609461 460 ntBASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 AL021920.2-201ENST00000624828 1351 ntBASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 AC138969.3-201ENST00000546612 1459 ntBASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 AC138932.2-201ENST00000548268 1459 ntBASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 AC126755.4-201ENST00000549796 1459 ntBASIC26.21■■□□□ 1.79
CFAP43Q8NDM7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFAP43Q8NDM7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CFAP43Q8NDM7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFAP43Q8NDM7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 AC142381.1-201ENST00000426099 345 ntBASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFAP43Q8NDM7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 AC008738.7-201ENST00000609744 511 ntBASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 TUBB8P12-201ENST00000308911 1335 ntBASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 TUBB7P-202ENST00000428444 1305 ntBASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 TUBB8P7-204ENST00000567960 1332 ntBASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC26.19■■□□□ 1.78
CFAP43Q8NDM7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 GRAMD4P3-201ENST00000621665 1669 ntBASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 AC004790.1-201ENST00000612686 536 ntBASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP43Q8NDM7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CFAP43Q8NDM7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 MIR6805-201ENST00000615055 62 ntBASIC26.16■■□□□ 1.78
CFAP43Q8NDM7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms