Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 KRT18P2-201ENST00000447938 1258 ntBASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 AC004967.1-201ENST00000453589 447 ntBASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 AC116353.5-201ENST00000638148 1699 ntBASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 AL020989.1-201ENST00000422979 469 ntBASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 AC093525.9-201ENST00000624961 1746 ntBASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 AD000864.1-201ENST00000624076 2295 ntBASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC33Q8N5R6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 AC006504.4-201ENST00000592118 1568 ntBASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 AL589182.2-201ENST00000619332 1049 ntBASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 AC079781.4-201ENST00000641908 219 ntBASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC33Q8N5R6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms