Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCML4Q8N228 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
SCML4Q8N228 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCML4Q8N228 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 AC012313.1-201ENST00000593393 3059 ntBASIC17.58■□□□□ 0.4
SCML4Q8N228 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SCML4Q8N228 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SCML4Q8N228 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.58■□□□□ 0.4
SCML4Q8N228 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.58■□□□□ 0.4
SCML4Q8N228 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.58■□□□□ 0.4
SCML4Q8N228 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.58■□□□□ 0.4
SCML4Q8N228 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 AL009183.1-201ENST00000603760 355 ntBASIC17.58■□□□□ 0.4
SCML4Q8N228 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
SCML4Q8N228 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SCML4Q8N228 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.58■□□□□ 0.4
SCML4Q8N228 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.58■□□□□ 0.4
SCML4Q8N228 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SCML4Q8N228 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.58■□□□□ 0.4
SCML4Q8N228 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SCML4Q8N228 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCML4Q8N228 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.58■□□□□ 0.4
SCML4Q8N228 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 KRT8P39-201ENST00000396270 1433 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SCML4Q8N228 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SCML4Q8N228 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.57■□□□□ 0.4
SCML4Q8N228 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SCML4Q8N228 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SCML4Q8N228 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.57■□□□□ 0.4
SCML4Q8N228 AC002056.1-201ENST00000395613 760 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 RPSAP43-201ENST00000402237 625 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 UPF3AP3-201ENST00000420996 769 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 ACTG1P14-201ENST00000446382 1122 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 HLA-J-202ENST00000469281 1241 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.57■□□□□ 0.4
SCML4Q8N228 YBX1P5-201ENST00000509441 847 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.57■□□□□ 0.4
SCML4Q8N228 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 AL031055.1-201ENST00000606362 631 ntBASIC17.57■□□□□ 0.4
SCML4Q8N228 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.57■□□□□ 0.4
SCML4Q8N228 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCML4Q8N228 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.57■□□□□ 0.4
SCML4Q8N228 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCML4Q8N228 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.57■□□□□ 0.4
SCML4Q8N228 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.56■□□□□ 0.4
SCML4Q8N228 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.56■□□□□ 0.4
SCML4Q8N228 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCML4Q8N228 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCML4Q8N228 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.56■□□□□ 0.4
SCML4Q8N228 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.56■□□□□ 0.4
SCML4Q8N228 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.56■□□□□ 0.4
SCML4Q8N228 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SCML4Q8N228 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.56■□□□□ 0.4
SCML4Q8N228 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 AC092474.2-201ENST00000424288 719 ntBASIC17.56■□□□□ 0.4
SCML4Q8N228 GPX1P2-201ENST00000429271 606 ntBASIC17.56■□□□□ 0.4
SCML4Q8N228 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 AC112191.1-201ENST00000523689 701 ntBASIC17.56■□□□□ 0.4
SCML4Q8N228 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.56■□□□□ 0.4
SCML4Q8N228 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.56■□□□□ 0.4
SCML4Q8N228 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.56■□□□□ 0.4
SCML4Q8N228 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SCML4Q8N228 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.56■□□□□ 0.4
SCML4Q8N228 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.56■□□□□ 0.4
SCML4Q8N228 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCML4Q8N228 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms