Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 AC093677.2-201ENST00000600169 1863 ntBASIC17.37■□□□□ 0.37
SIX5Q8N196 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIX5Q8N196 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SIX5Q8N196 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SIX5Q8N196 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.36■□□□□ 0.37
SIX5Q8N196 MIR4453-201ENST00000584019 89 ntBASIC17.36■□□□□ 0.37
SIX5Q8N196 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.36■□□□□ 0.37
SIX5Q8N196 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SIX5Q8N196 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SIX5Q8N196 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SIX5Q8N196 FER1L4-210ENST00000615531 5998 ntBASIC17.35■□□□□ 0.37
SIX5Q8N196 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SIX5Q8N196 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SIX5Q8N196 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SIX5Q8N196 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.35■□□□□ 0.37
SIX5Q8N196 AC027369.6-201ENST00000525520 931 ntBASIC17.35■□□□□ 0.37
SIX5Q8N196 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 TNRC18P3-201ENST00000441896 2691 ntBASIC17.35■□□□□ 0.37
SIX5Q8N196 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 AC099398.1-201ENST00000567919 2776 ntBASIC17.35■□□□□ 0.37
SIX5Q8N196 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.35■□□□□ 0.37
SIX5Q8N196 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SIX5Q8N196 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SIX5Q8N196 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIX5Q8N196 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.35■□□□□ 0.37
SIX5Q8N196 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SIX5Q8N196 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SIX5Q8N196 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIX5Q8N196 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SIX5Q8N196 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms