Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SLF2Q8IX21 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLF2Q8IX21 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLF2Q8IX21 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLF2Q8IX21 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.19■□□□□ 0.82
SLF2Q8IX21 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 AL512356.2-201ENST00000546955 174 ntBASIC20.18■□□□□ 0.82
SLF2Q8IX21 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 MIR4492-201ENST00000581627 80 ntBASIC20.18■□□□□ 0.82
SLF2Q8IX21 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF2Q8IX21 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF2Q8IX21 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 CNN2P2-201ENST00000443536 909 ntBASIC20.17■□□□□ 0.82
SLF2Q8IX21 CNN2P3-201ENST00000450201 906 ntBASIC20.17■□□□□ 0.82
SLF2Q8IX21 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 LINC01225-203ENST00000563550 1244 ntBASIC20.17■□□□□ 0.82
SLF2Q8IX21 AC011467.4-201ENST00000594891 528 ntBASIC20.17■□□□□ 0.82
SLF2Q8IX21 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 AL136317.3-201ENST00000618497 906 ntBASIC20.17■□□□□ 0.82
SLF2Q8IX21 AP001059.3-201ENST00000619053 235 ntBASIC20.17■□□□□ 0.82
SLF2Q8IX21 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF2Q8IX21 UXT-AS1-201ENST00000590504 1525 ntBASIC20.17■□□□□ 0.82
SLF2Q8IX21 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF2Q8IX21 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 CROCCP2-202ENST00000412962 2773 ntBASIC20.16■□□□□ 0.82
SLF2Q8IX21 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.16■□□□□ 0.82
SLF2Q8IX21 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 AC093512.1-201ENST00000617969 520 ntBASIC20.16■□□□□ 0.82
SLF2Q8IX21 AC008267.7-201ENST00000624570 1194 ntBASIC20.16■□□□□ 0.82
SLF2Q8IX21 AC084121.4-201ENST00000641598 221 ntBASIC20.16■□□□□ 0.82
SLF2Q8IX21 AF228730.8-201ENST00000642140 221 ntBASIC20.16■□□□□ 0.82
SLF2Q8IX21 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLF2Q8IX21 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLF2Q8IX21 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms