Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERC6Q8IVU3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 WASH6P-202ENST00000359512 1437 ntBASIC18.33■□□□□ 0.53
HERC6Q8IVU3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC6Q8IVU3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 MRPS18AP1-201ENST00000414458 589 ntBASIC18.33■□□□□ 0.52
HERC6Q8IVU3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.33■□□□□ 0.52
HERC6Q8IVU3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.32■□□□□ 0.52
HERC6Q8IVU3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 HLA-V-201ENST00000429037 534 ntBASIC18.32■□□□□ 0.52
HERC6Q8IVU3 RN7SL692P-201ENST00000464677 288 ntBASIC18.32■□□□□ 0.52
HERC6Q8IVU3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 AP000842.3-202ENST00000569238 1080 ntBASIC18.32■□□□□ 0.52
HERC6Q8IVU3 AC009118.2-201ENST00000613275 655 ntBASIC18.32■□□□□ 0.52
HERC6Q8IVU3 AC008267.7-201ENST00000624570 1194 ntBASIC18.32■□□□□ 0.52
HERC6Q8IVU3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
HERC6Q8IVU3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 REXO1L11P-201ENST00000620964 1927 ntBASIC18.31■□□□□ 0.52
HERC6Q8IVU3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 AC138028.4-201ENST00000564984 1845 ntBASIC18.31■□□□□ 0.52
HERC6Q8IVU3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 COX5BP8-201ENST00000416911 349 ntBASIC18.31■□□□□ 0.52
HERC6Q8IVU3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 MIR4453-201ENST00000584019 89 ntBASIC18.31■□□□□ 0.52
HERC6Q8IVU3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms