Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KDM3BQ7LBC6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KDM3BQ7LBC6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KDM3BQ7LBC6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
KDM3BQ7LBC6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 SPDYE7P-202ENST00000420373 878 ntBASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 TREML5P-201ENST00000421694 576 ntBASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 AC107890.1-201ENST00000422478 521 ntBASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 AL603756.1-201ENST00000606511 2163 ntBASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KDM3BQ7LBC6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 AP3S2-216ENST00000617003 1561 ntBASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 IGHV3-62-201ENST00000520057 340 ntBASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 AC069120.2-201ENST00000524091 540 ntBASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 DUX4L27-201ENST00000554796 1261 ntBASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 AC007967.4-201ENST00000614700 386 ntBASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 AP001094.4-201ENST00000579008 2176 ntBASIC21.4■■□□□ 1.02
KDM3BQ7LBC6 PCDHB18P-201ENST00000524813 2368 ntBASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 TUBB3P1-201ENST00000405796 1332 ntBASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KDM3BQ7LBC6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 AC093724.1-201ENST00000448659 1027 ntBASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 AC078925.2-201ENST00000624013 1973 ntBASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
KDM3BQ7LBC6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 HLA-J-202ENST00000469281 1241 ntBASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 RARRES2P9-201ENST00000565168 469 ntBASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 PKD1P6-201ENST00000343738 4769 ntBASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.38■■□□□ 1.01
KDM3BQ7LBC6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms