Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC38Q5VT99 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 CYP2T1P-202ENST00000641596 2535 ntBASIC17.63■□□□□ 0.41
LRRC38Q5VT99 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 SAPCD2P3-201ENST00000455031 850 ntBASIC17.63■□□□□ 0.41
LRRC38Q5VT99 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 PRELID1P1-202ENST00000567272 903 ntBASIC17.63■□□□□ 0.41
LRRC38Q5VT99 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LRRC38Q5VT99 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AKR1C7P-201ENST00000305623 895 ntBASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AC025062.2-201ENST00000605477 670 ntBASIC17.62■□□□□ 0.41
LRRC38Q5VT99 REXO1L3P-201ENST00000622202 1288 ntBASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AL805961.1-202ENST00000641562 540 ntBASIC17.62■□□□□ 0.41
LRRC38Q5VT99 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC38Q5VT99 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 PTCHD3P3-201ENST00000403073 906 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 LAGE3P1-201ENST00000425356 484 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 AC087163.2-201ENST00000457299 853 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 MIR4492-201ENST00000581627 80 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 MPDU1-223ENST00000582151 728 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 LINC01711-201ENST00000598340 967 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 AC002310.6-201ENST00000624451 1377 ntBASIC17.61■□□□□ 0.41
LRRC38Q5VT99 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC38Q5VT99 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms