Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 LINC00895-201ENST00000629028 1637 ntBASIC16.24■□□□□ 0.19
SPIN4Q56A73 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.24■□□□□ 0.19
SPIN4Q56A73 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPIN4Q56A73 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 AL603756.1-201ENST00000606511 2163 ntBASIC16.23■□□□□ 0.19
SPIN4Q56A73 AL391256.1-201ENST00000443260 1855 ntBASIC16.23■□□□□ 0.19
SPIN4Q56A73 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 SAPCD2P3-201ENST00000455031 850 ntBASIC16.23■□□□□ 0.19
SPIN4Q56A73 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SPIN4Q56A73 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPIN4Q56A73 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 SART3-203ENST00000546611 1184 ntBASIC16.22■□□□□ 0.19
SPIN4Q56A73 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 MTDHP4-201ENST00000600287 670 ntBASIC16.22■□□□□ 0.19
SPIN4Q56A73 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.22■□□□□ 0.19
SPIN4Q56A73 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPIN4Q56A73 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms